Jump to content

Retention time calculator for peptides


Recommended Posts

If you know formula, you can use Excel or Open Office Spreadsheet..

If you don't know formula, but know website which is giving correct results, press ctrl-u to show HTML and JavaScript source code, and then find it, and copy it to Spreadsheet.

 

Edited by Sensei
Link to comment
Share on other sites

I am not aware of web-based tools. Most that I have used require some time of database of retention times for time correction and many are integrated into certain packages (such as Skyline). There are also others, including commercial packages,  but I never used any of them

Ultimately I found it easier to just create your own database using reference standards as the predictions were not super accurate and I found them most useful except to screen out compounds (might be different for you application). But especially with modified peptides things are tricky.

I faintly recall an open source model that was called OPERA-RT (I think). But have no experience with it.

Link to comment
Share on other sites

Create an account or sign in to comment

You need to be a member in order to leave a comment

Create an account

Sign up for a new account in our community. It's easy!

Register a new account

Sign in

Already have an account? Sign in here.

Sign In Now
 Share

×
×
  • Create New...

Important Information

We have placed cookies on your device to help make this website better. You can adjust your cookie settings, otherwise we'll assume you're okay to continue.