SaulGoodman

Hello all together, I have a question that explicitly refers to a SNP that is calculated to have a damaging/deletious effect. Now I ask myself whether this effect should also be seen in the IGV? It is exactly this SNP (https://varsome.com/variant/hg38/chr2-165315571-C-T?). Can anyone give me tips on how to track down the SNP and tell me more precisely whether the calculations are correct? I have the sample in front of me, a screenshot is attached. And if I should be completely on the wrong track I would also like to know why. I want to learn I thank you in advance to everyone who gives me an answer here.