Sequencing Project in Genetics Posted December 6, 2011 Given the sequence: TCAGTTCAGCCCTCACCATTGCTCTGCAACTCAGAACAGTTACTACTGAGACTACCCTGAGAAGAGGATG GTCCTAAACAGAGCTCTGATTCTGGGGGCCCTCACCCTGACCACCATGACAAGCCTCTGTGGAGGTGAAG ACATTGTGGCGGACCACGTTGGCACTTATGGCACAGACTTCTACCAATCTCATGGTCCTTCTGGCCAGTA CATCCACCAATTTGATGGAGACGAGGAGTTTTATGTGGACCTGGAGAAGGAAGAGGCTGTCTGGAGGCTG CCTATGTTTGATAAATTACGTTTTCACCCGCAAGGTGCACTGAGAAACATAGCTATAGCGAAACACAACT TGGATGTTCTGACAAAACTCTACAACTTTACCCCTGTTATCAATGAGGTTCCAGAGGTGACTGTGTTTTC CAAGTCTCCCGTGATGCTGAGTCAGCCCAATACCCTCATCTGTCACGTGGACAACATCTTTCCCCCTGTG ATCAACATCACATGGTTGAGAAACGGGCACTCTGTCACAGAGCATGTTTCTGAGACCAGCTTCCTCCTCA GAAGTGATTATTCCTACCTCAAGATAAGTTATCTCCCCTTCCGCCCTTCTGATGATGATGTTTATGACTG CAAAGTGGAGCACTGGGGCCTGGATGAGCCACTGCTCAAACACTGGGAGCCTGAAATTCCAGCCCCTATG TCAGAGCTGACAGAGACTGTGGTCTGTGCCCTGGGGTTGACCGTGGGCCTCGTGGGCATCGTGGTGGGCA CTGTCCTCATCACCCGAGGTCTGCGCTCAAGTGGGGCCTCCAGACACCAAGGGCCCTTGTGAGTCACACT CCAGTAGGAAGGTGTACTGTCCATCTACAAGAACAGAAAAATGGACATACTAGATGACCTGGAACTATTT TCTGGCCAAGTTCATCACGTACCTTTTCTCCTTCTGCCCTCCTCTGCTCACCTCTTCTCTGGGAAATAGG ATGCTGTATCACCTCAGAGTTCACATATACCTCAGAGTTCTTGCCCTGACTATGTGATATTTCTTTCTCT TCTCATCAGTTGCATAACATGGAATTGCTACGGTATTCCACCCAATAACCTAATCTCTAGTGACCCTGAT CCCATGTCACCACGGAAGCAATAAATCCTTCTTTTATCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA we have to find... a.Start codon (red)and Kozak sequence (blue). b.Stop codon(red) c.exon boundaries(yellow). d.reading frame (+1, +2 or +3). e.polyadenylation signal (not polyA tail)(green). We we're told to use the NCBI blasting website to help. If you could help with any of them, please let me know!! 0
Sequencing Project
in Genetics
Posted
Given the sequence:
TCAGTTCAGCCCTCACCATTGCTCTGCAACTCAGAACAGTTACTACTGAGACTACCCTGAGAAGAGGATG
GTCCTAAACAGAGCTCTGATTCTGGGGGCCCTCACCCTGACCACCATGACAAGCCTCTGTGGAGGTGAAG
ACATTGTGGCGGACCACGTTGGCACTTATGGCACAGACTTCTACCAATCTCATGGTCCTTCTGGCCAGTA
CATCCACCAATTTGATGGAGACGAGGAGTTTTATGTGGACCTGGAGAAGGAAGAGGCTGTCTGGAGGCTG
CCTATGTTTGATAAATTACGTTTTCACCCGCAAGGTGCACTGAGAAACATAGCTATAGCGAAACACAACT
TGGATGTTCTGACAAAACTCTACAACTTTACCCCTGTTATCAATGAGGTTCCAGAGGTGACTGTGTTTTC
CAAGTCTCCCGTGATGCTGAGTCAGCCCAATACCCTCATCTGTCACGTGGACAACATCTTTCCCCCTGTG
ATCAACATCACATGGTTGAGAAACGGGCACTCTGTCACAGAGCATGTTTCTGAGACCAGCTTCCTCCTCA
GAAGTGATTATTCCTACCTCAAGATAAGTTATCTCCCCTTCCGCCCTTCTGATGATGATGTTTATGACTG
CAAAGTGGAGCACTGGGGCCTGGATGAGCCACTGCTCAAACACTGGGAGCCTGAAATTCCAGCCCCTATG
TCAGAGCTGACAGAGACTGTGGTCTGTGCCCTGGGGTTGACCGTGGGCCTCGTGGGCATCGTGGTGGGCA
CTGTCCTCATCACCCGAGGTCTGCGCTCAAGTGGGGCCTCCAGACACCAAGGGCCCTTGTGAGTCACACT
CCAGTAGGAAGGTGTACTGTCCATCTACAAGAACAGAAAAATGGACATACTAGATGACCTGGAACTATTT
TCTGGCCAAGTTCATCACGTACCTTTTCTCCTTCTGCCCTCCTCTGCTCACCTCTTCTCTGGGAAATAGG
ATGCTGTATCACCTCAGAGTTCACATATACCTCAGAGTTCTTGCCCTGACTATGTGATATTTCTTTCTCT
TCTCATCAGTTGCATAACATGGAATTGCTACGGTATTCCACCCAATAACCTAATCTCTAGTGACCCTGAT
CCCATGTCACCACGGAAGCAATAAATCCTTCTTTTATCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
we have to find...
a.Start codon (red)and Kozak sequence (blue).
b.Stop codon(red)
c.exon boundaries(yellow).
d.reading frame (+1, +2 or +3).
e.polyadenylation signal (not polyA tail)(green).
We we're told to use the NCBI blasting website to help.
If you could help with any of them, please let me know!!